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Biomedical Information Technology
Conditional Remix & Share Permitted
CC BY-NC-SA
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This course teaches the design of contemporary information systems for biological and medical data. Examples are chosen from biology and medicine to illustrate complete life cycle information systems, beginning with data acquisition, following to data storage and finally to retrieval and analysis. Design of appropriate databases, client-server strategies, data interchange protocols, and computational modeling architectures. Students are expected to have some familiarity with scientific application software and a basic understanding of at least one contemporary programming language (e.g. C, C++, Java, Lisp, Perl, Python). A major term project is required of all students. This subject is open to motivated seniors having a strong interest in biomedical engineering and information system design with the ability to carry out a significant independent project.
This course was offered as part of the Singapore-MIT Alliance (SMA) program as course number SMA 5304.

Subject:
Applied Science
Biology
Business and Communication
Computer Science
Engineering
Health, Medicine and Nursing
Life Science
Material Type:
Full Course
Provider:
MIT
Provider Set:
MIT OpenCourseWare
Author:
Bhowmick, Sourav
Dewey, C.
Yu, Hanry
Date Added:
09/01/2008
Data Carpentry for Biologists
Unrestricted Use
CC BY
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The Biology Semester-long Course was developed and piloted at the University of Florida in Fall 2015. Course materials include readings, lectures, exercises, and assignments that expand on the material presented at workshops focusing on SQL and R.

Subject:
Applied Science
Biology
Computer Science
Information Science
Life Science
Mathematics
Measurement and Data
Material Type:
Module
Provider:
The Carpentries
Author:
Ethan White
Zachary Brym
Date Added:
08/07/2020
Data Management with SQL for Ecologists
Unrestricted Use
CC BY
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Databases are useful for both storing and using data effectively. Using a relational database serves several purposes. It keeps your data separate from your analysis. This means there’s no risk of accidentally changing data when you analyze it. If we get new data we can rerun a query to find all the data that meets certain criteria. It’s fast, even for large amounts of data. It improves quality control of data entry (type constraints and use of forms in Access, Filemaker, etc.) The concepts of relational database querying are core to understanding how to do similar things using programming languages such as R or Python. This lesson will teach you what relational databases are, how you can load data into them and how you can query databases to extract just the information that you need.

Subject:
Applied Science
Computer Science
Information Science
Mathematics
Measurement and Data
Material Type:
Module
Provider:
The Carpentries
Author:
Christina Koch
Donal Heidenblad
Katy Felkner
Rémi Rampin
Timothée Poisot
Date Added:
03/20/2017
Data Management with SQL for Social Scientists
Unrestricted Use
CC BY
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This is an alpha lesson to teach Data Management with SQL for Social Scientists, We welcome and criticism, or error; and will take your feedback into account to improve both the presentation and the content. Databases are useful for both storing and using data effectively. Using a relational database serves several purposes. It keeps your data separate from your analysis. This means there’s no risk of accidentally changing data when you analyze it. If we get new data we can rerun a query to find all the data that meets certain criteria. It’s fast, even for large amounts of data. It improves quality control of data entry (type constraints and use of forms in Access, Filemaker, etc.) The concepts of relational database querying are core to understanding how to do similar things using programming languages such as R or Python. This lesson will teach you what relational databases are, how you can load data into them and how you can query databases to extract just the information that you need.

Subject:
Applied Science
Computer Science
Information Science
Mathematics
Measurement and Data
Social Science
Material Type:
Module
Provider:
The Carpentries
Author:
Peter Smyth
Date Added:
08/07/2020
Database (08:02): Database Management Systems
Only Sharing Permitted
CC BY-ND
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Database Management Systems is the software that allows us to create and use a database. This video looks at the DBMS, their functions, some examples of popular software solutions and a quick look at Structured Query Language (SQL)

Subject:
Applied Science
Business and Communication
Information Science
Material Type:
Lecture
Provider:
Mr. Ford's Class
Author:
Scott Ford
Date Added:
09/26/2014
Databases and SQL
Conditional Remix & Share Permitted
CC BY-NC-SA
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This unit discusses the purposes of databases, a relational database, and the querying language SQL. Students will design a simple database using data modeling and normalization. This unit will define basic data operations, provide instruction on how to create common query statements, and discuss SQL implementation.

Subject:
Applied Science
Health, Medicine and Nursing
Material Type:
Lecture
Provider:
Open Michigan
Provider Set:
Health IT Workforce Curriculum
Author:
Oregon Health & Science University
Date Added:
09/26/2014
Databases and SQL
Unrestricted Use
CC BY
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Software Carpentry lesson that teaches how to use databases and SQL In the late 1920s and early 1930s, William Dyer, Frank Pabodie, and Valentina Roerich led expeditions to the Pole of Inaccessibility in the South Pacific, and then onward to Antarctica. Two years ago, their expeditions were found in a storage locker at Miskatonic University. We have scanned and OCR the data they contain, and we now want to store that information in a way that will make search and analysis easy. Three common options for storage are text files, spreadsheets, and databases. Text files are easiest to create, and work well with version control, but then we would have to build search and analysis tools ourselves. Spreadsheets are good for doing simple analyses, but they don’t handle large or complex data sets well. Databases, however, include powerful tools for search and analysis, and can handle large, complex data sets. These lessons will show how to use a database to explore the expeditions’ data.

Subject:
Applied Science
Computer Science
Information Science
Mathematics
Measurement and Data
Material Type:
Module
Provider:
The Carpentries
Author:
Amy Brown
Andrew Boughton
Andrew Kubiak
Avishek Kumar
Ben Waugh
Bill Mills
Brian Ballsun-Stanton
Chris Tomlinson
Colleen Fallaw
Dan Michael Heggø
Daniel Suess
Dave Welch
David W Wright
Deborah Gertrude Digges
Donny Winston
Doug Latornell
Erin Alison Becker
Ethan Nelson
Ethan P White
François Michonneau
George Graham
Gerard Capes
Gideon Juve
Greg Wilson
Ioan Vancea
Jake Lever
James Mickley
John Blischak
JohnRMoreau@gmail.com
Jonah Duckles
Jonathan Guyer
Joshua Nahum
Kate Hertweck
Kevin Dyke
Louis Vernon
Luc Small
Luke William Johnston
Maneesha Sane
Mark Stacy
Matthew Collins
Matty Jones
Mike Jackson
Morgan Taschuk
Patrick McCann
Paula Andrea Martinez
Pauline Barmby
Piotr Banaszkiewicz
Raniere Silva
Ray Bell
Rayna Michelle Harris
Rémi Emonet
Rémi Rampin
Seda Arat
Sheldon John McKay
Sheldon McKay
Stephen Davison
Thomas Guignard
Trevor Bekolay
lorra
slimlime
Date Added:
03/20/2017
Environmental Engineering Applications of Geographic Information Systems
Conditional Remix & Share Permitted
CC BY-NC-SA
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This graduate seminar is taught in a lecture and lab exercise format. The subject matter is tailored to introduce Environmental Engineering students to the use and potential of Geographic Information Systems in their discipline. Lectures will cover the general concepts of GIS use and introduce the material in the exercises that demonstrate the practical application of GIS.

Subject:
Applied Science
Business and Communication
Computer Science
Engineering
Environmental Science
Physical Geography
Physical Science
Social Science
Material Type:
Full Course
Provider:
MIT
Provider Set:
MIT OpenCourseWare
Author:
Sheehan, Daniel
Date Added:
09/01/2004
Introduction to Modern Database Systems
Unrestricted Use
CC BY
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This course provides a general overview of databases, including topics such as database history, modern database systems, the different models used to design a database, and Structured Query Language (SQL), which is the standard language used to access and manipulate databases. Upon successful completion of this course, the student will be able to: compare and contrast the database approach and the file system approach; explain what a database management system is as well as the various components; identify the various people involved in database management systems; explain the historical background of database management systems; compare the various database models; describe the functions of a database management system; explain the three-schema database architecture; describe what tables, indexes, and views are as well as discuss the differences among them; explain the entity-relationship model; develop an entity-relationship model based on user requirements; describe the relational database model; explain the process of normalization; convert an entity-relationship diagram to a set of normalized relations; explain referential integrity; identify how relational algebra is used to construct queries; describe and use data definition commands; describe and use data manipulation commands; explain how to join tables together for queries. (Computer Science 403)

Subject:
Applied Science
Computer Science
Material Type:
Full Course
Provider:
The Saylor Foundation
Date Added:
11/16/2011
Les fondements des bases de données
Conditional Remix & Share Permitted
CC BY-SA
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Une base de données est un ensemble volumineux de données, structuré et stocké sur un support permanent, et géré efficacement par les systèmes de gestion de bases de données SGBD. Ce cours présente les Caractéristiques des SGBD ainsi que des modèles de données à travers UML : Diagramme de classes (associations binaires et ternaires, réflexives, classes-association). Il aborde aussi la Normalisation (les 3 premières formes normales). Traduction du diagramme des classes en tables dans le respect des formes normales. la mise en œuvre se fera à travers le langage normalisé Structured Query Language (SQL).

Subject:
Computer Science
Material Type:
Module
Author:
Borlli Michel Jonas SOME
Date Added:
11/22/2019
Library Carpentry: SQL
Unrestricted Use
CC BY
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Library Carpentry, an introduction to SQL for Librarians This Library Carpentry lesson introduces librarians to relational database management system using SQLite. At the conclusion of the lesson you will: understand what SQLite does; use SQLite to summarise and link data.

Subject:
Applied Science
Information Science
Mathematics
Measurement and Data
Material Type:
Module
Provider:
The Carpentries
Author:
222064h
Anna-Maria Sichani
Belinda Weaver
Christopher Erdmann
Dan Michael Heggø
David Kane
Elaine Wong
Emanuele Lanzani
Fernando Rios
Jamene Brooks-Kieffer
James Baker
Janice Chan
Jeffrey Oliver
Katrin Leinweber
Kunal Marwaha
Reid Otsuji
Ruud Steltenpool
Tim Dennis
mdschleu
orobecca
thegsi
Date Added:
08/07/2020