This version of this teaching module was published in Teaching Issues and Experiments in Ecology:

Jim McNeil and Megan A. Jones. April 2018, posting date. Data Management using National Ecological Observatory Network’s (NEON) Small Mammal Data with Accompanying Lesson on Mark Recapture Analysis. Teaching Issues and Experiments in Ecology, Vol. 13: Practice #9 [online]. http://tiee.esa.org/vol/v13/issues/data_sets/mcneil/abstract.html

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Undergraduate STEM students are graduating into professions that require them to manage and work with data at many points of a data management life cycle. Within ecology, students are presented not only with many opportunities to collect data themselves, but increasingly to access and use public data collected by others. This activity introduces the basic concept of data management from the field through to data analysis. The accompanying presentation materials mention the importance of considering long-term data storage and data analysis using public data.

This data set is a subset of small mammal trapping data from the National Ecological Observatory Network (NEON). The accompanying lesson introduces students to proper data management practices including how data moves from collection to analysis. Students perform basic spreadsheet tasks to complete a Lincoln-Peterson mark-recapture calculation to estimate population size for a species of small mammal. Pairs of students will work on different sections of the datasets allowing for comparison between seasons or, if instructors download additional data, between sites and years. Data from six months at NEON’s Smithsonian Conservation Biology Institute (SCBI) field site are included in the materials download. Data from other years or locations can be downloaded directly from the NEON data portal to tailor the activity to a specific location or ecological topic.

In this activity, students will:

- discuss data management practices with the faculty. Presentation slides are provided to guide this discussion.
- view field collection data sheets to understand how organized data sheets can be constructed.
- design a spreadsheet data table for transcription of field collected data using good data management practices.
- view NEON small mammal trapping data to a) see a standardized spreadsheet data table and b) see what data are collected during NEON small mammal trapping.
- use Microsoft Excel or Google Sheets to conduct a simple Lincoln-Peterson Mark-Recapture analysis to estimate plot level species population abundance.

Please note that this lesson was developed while the NEON project was still in construction. There may be future changes to the format of collected and downloaded data. If using data directly from the NEON Data Portal instead of using the data sets accompanying this lesson, we recommend testing out the data each year prior to implementing this lesson in the classroom.

This module was originally taught starting with a field component where students accompanied NEON technicians during the small mammal trapping. As this is not a possibility for most courses, the initial part of the lesson has been modified to include optional videos that instructors can use to show how small mammal trapping is conducted. Instructors are also encouraged to bring small mammal traps and small mammal specimens into the classroom where available.

The Data Sets

The National Ecological Observatory Network is a program sponsored by the National Science Foundation and operated under cooperative agreement by Battelle Memorial Institute. This material is based in part upon work supported by the National Science Foundation through the NEON Program.

The following datasets are posted for educational purposes only. Data for research purposes should be obtained directly from the National Ecological Observatory Network (www.neonscience.org).

Data Citation: National Ecological Observatory Network. 2017. Data Product: NEON.DP1.10072.001. Provisional data downloaded from http://data.neonscience.org. Battelle, Boulder, CO, USA

Notes
Version 2.1: Includes correct Lincoln-Peterson Index formula in PPT, faculty, and student notes.

Version 2.0: This version of the teaching module was published in Teaching Issues and Experiments in Ecology. McNeil and Jones 2018. This version reflects updates based on comments from reviewers.

Version 1.0: This version of the teaching module was prepared as part of the 2017 DIG FMN. It was submitted for publication as part of the DIG Special Issue of TIEE.

Cite this work
Researchers should cite this work as follows:

Jim McNeil, Megan A. Jones (2018). Data Management using National Ecological Observatory Network's (NEON) Small Mammal Data with Accompanying Lesson on Mark Recapture Analysis. NEON - National Ecological Observatory Network, (Version 2.1). QUBES Educational Resources. doi:10.25334/Q4M121

The laboratory notebook is the cornerstone of any laboratory course. Students develop critical thinking, documentation, and communication skills while mastering scientific concepts. Furthermore, the use of electronic lab notebooks (ELNs) for documentation has become the standard for data management in industry and academic labs.

Replacing paper with an interactive research notebook provides students with authentic data management skills. It also offers a medium for easily incorporating quantitative reasoning into the curriculum to address real. Instructors using digital notebooks in their courses reported a significant increase in student engagement and assessment scores.

In this workshop, we will explore the current ELNs landscape and best practices for moving from paper to digital.

Cite this work
Researchers should cite this work as follows:

Stringer, N. (2019). Electronic Lab Notebooks: Options for Building Data Management and Quantitative Reasoning Skills. Evolution of Data in the Classroom: From Data to Data Science (SW 2019), QUBES Educational Resources. doi:10.25334/B1NP-B249

Description
This lesson introduces students to working with metadata, which can be broadly thought of as the data ABOUT existing data. Data isn’t complete without metadata, and this lesson will help students understand both how to work with metadata and how to create their own.

Data used: NEON aquatic macroinvertebrate datasets from multiple stations. It could be adapted to use any data sets or taxonomic groups though.

Activities: The lesson involves three major activities. 1) Querying and downloading datasets and corresponding products from NEON. 2) Reading and answering comprehension questions about metadata files that correspond with data files 3) Combining two datasets based off understanding the metadata in exercise 2 (e.g. understanding which columns indicate sampling dates and in which formats will allow them to appropriately combine multiple data sets).

Programs: No specific programming skills or language is required for this lesson. This lesson is designed to be done entirely in common office/student software programs (e.g. Microsoft Word and Microsoft Office) and could be done using online programs (e.g. my university has student licenses for Google Spreadsheets and Google Docs).

Learning objectives:

1 – Students will be able to define ‘metadata’ and understand how metadata is critical for reproducible research.

2 – Students will be able to correctly answer comprehension questions about a metadata file.

3 – Students will be able to apply their understanding of the metadata file to create a new data file from two data sets.

4 – Students will understand the importance of creating and understanding metadata to go along with datasets.

Timing: This lesson was designed to take place in two – 75 minute class periods that are in a workshop format. This lesson could easily be part of a longer lab, homework, or a remote / online / asynchronous assignment.

Notes
This version is current as of Spring 2019 and was classroom taught. I encourage folks to adapt, modify, and make new versions.

Cite this work
Researchers should cite this work as follows:

Whitney, K. S. (2019). Introduction to Data Management and Metadata using NEON aquatic macroinvertebrate data. NEON Faculty Mentoring Network, QUBES Educational Resources. doi:10.25334/SJX1-F373

Here web link lists all the documents related to the Open Educational Resources (OER).

For decades, the media have given enormous attention to sensational claims that vague lights in the sky are actually extra-terrestrial spacecraft. Recently, there has been a flurry of misleading publicity about UFOs on military photographs. A sober examination of these claims reveals that there is a lot LESS to them than first meets the eye: when there is enough evidence, UFO claims can be explained by terrestrial or celestial phenomena (including lights from human craft and re-entering space junk). This up-to-date guide provides key resources available free on the Web, to help scientists, educators, students, and journalists learn about the skeptical perspective (and the background stories) behind these claims.

The School of Data aims to make your learning experience as tailored as possible through independent learning modules. Learning modules are all stand-alone and can be taken in any order. To make your learning experience easier, we curated modules into a series of courses - with a focus on data basics as well as specific skills. When you identified the course you're interested in click on "Show Modules" to see all modules you might want to take.

Schuylkill County Librarian resources is a collaboration space for librarians to share their favorite resources such as curriculum tools, websites, and interactive activities.

Schuylkill County Librarian resources is a collaboration space for librarians to share their favorite resources such as curriculum tools, websites, and interactive activities.

Highly selective bibliographies containing reviews and primary literature that are updated at least annually. A good place to start for papers, labs, and projects.

Hundreds of scientific articles. Written for middle and high school students. Approved by scientists. Free.

A database of and access to journal articles and book chapters found useful by college and university science students; built from student work at Grinnell College, Grinnell, IA, USA. Used in science courses (especially Biology and Psychology courses) at Grinnell College.

Reports, maps, notes, letters, diagrams, sketches, and more represent a broad sample of communication styles, formats, and methods in a wide range of scientific disciplines

Volcanic eruptions can produce large amounts of debris in the form of sediment. Volcanic sediment is a serious hazard that can flood river valleys, bury homes and wash out bridges and roads. In the 1980 eruption of Mount St. Helens, many billions of cubic meters of sediment flowed down from the mountain through the surrounding river valleys, which caused major flooding and damage to the homes of people living downstream.

In the “Sediment on the Move” storyline, fourth-grade students explore the hazards of volcanic sediment and solve the problem of managing these hazards. This robustly developed and problem-based learning unit supports teachers in creating a rigorous and rich experience for students through use of fully-developed teacher support resources (Google Slides for students ready to be used), rich media (videos, images, first-person narratives), and a plethora of engaging and 3-dimensional formative assessments.

Through various activities, scientific inquiry and exploration, students become acquainted with the size and scale of volcanic sediment as a long-term hazard for communities that live downstream of volcanoes. In this unit students design their own community and roleplay as city council members. Students collaborate with characters who model real-world career professionals (such as engineers, geologists and emergency managers) who help them design their own solutions to the problem of volcanic sediment. Through science, teamwork, and communication, students generate and compare multiple solutions to help their community be prepared for the hazards and challenges from volcanic sediment. At the end of the storyline, students create recommendations and design plans to share with other communities facing similar challenges.

This is a great resource from the CDC on how college campuses can gain strategies to prevent sexual violence.

Southwest Tennessee Community College

Personal Health Syllabus

The Society for the Improvement of Psychological Science (SIPS) is an organization whose mission focuses on bringing together scholars who want to improve methods and practices in psychological science. The organization reaffirmed in June 2020 that “[we] cannot do good science without diverse voices,” and acknowledged that “right now the demographics of SIPS are unrepresentative of the field of psychology, which is in turn unrepresentative of the global population. We have work to do when it comes to better supporting Black scholars and other underrepresented minorities.”

The purpose of the Global Engagement Task Force, started in January 2020, was to explore suggestions made after the 2019 Annual Conference, held in Rotterdam, the Netherlands, around inclusion and access for scholars from regions outside of the United States, Canada, and Western Europe (described in the report as “geographically diverse” regions), a task complicated by the COVID-19 pandemic and civil unrest in several task force members’ countries of residence. This report outlines several suggestions, specifically around building partnerships with geographically diverse open science organizations; increasing SIPS presence at other, more local events; diversifying remote events; considering geographically diverse annual conference locations; improving membership and financial resources; and surveying open science practitioners from geographically diverse regions.

In our new Species at Risk (SAR) education kit, each lesson addresses a species at risk through an Ocean Wise conservation initiative. Students will learn about the humpback whale and climate change, the killer whale and ocean pollution, the great white shark and bycatch, the hawksbills sea turtle and plastic pollution, and the sea otter and loss of kelp habitat, plus ways to take action to protect them! Equipped with the proper knowledge and tools, students will acquire an impactful learning experience to empower them to become ocean champions and stewards for species at risk.

The Earth’s ocean and its interconnected systems depend on marine species to maintain the efficiency and balance of the functioning of their ecosystems. Their role in the ocean has a direct impact on its health and our own. And yet, every day, thousands of animals fall victim to anthropogenic threats imposed on the ocean by human activity. It is going to take a deep, transformational change in humanity’s consciousness and behaviours regarding our oceans to ensure the protection of species. We believe this is possible by providing climate and conservation education to our youth to raise awareness on the interconnectedness between our lives and the ocean, and the importance of the role that each species holds on our planet.

This learning sequence is anchored in the phenomena: Salmon populations in the Pacific Northwest are declining.

Part of the job of Washington Department of Fish and Wildlife (WDFW) is to figure out why salmon populations are declining and create plans for how to help increase fish populations. Throughout this unit, students will engage with the phenomenon of Pacific salmon population decline as they explore salmonid species and discover how WDFW raises healthy fish in hatcheries.

Students will explore salmonid life cycles and discover patterns among life cycles of plants and animals who interact with salmon. Students will then learn what makes healthy habitats for salmon. They will evaluate solutions to the problems of salmon migration above and below dams and examine salmons’ role in a healthy river system. Students will embark on a virtual field trip (in person field trips also available) to a WDFW fish hatchery to learn about current practices in hatchery management and identify ways the hatchery meets the habitat needs of fish. Finally, students will be called to work as an engineering team and help develop a tool to support salmon recovery by working as conservation engineers.

A ready-to-go class session or sessions on source and content evaluation, especially related to science information. Algorithms and predatory publishers are covered as part of the lesson. Links to information and examples as well as a large-group or small-group class activity are included.